Package: greatR 2.0.0.9000

greatR: Gene Registration from Expression and Time-Courses in R

A tool for registering (aligning) gene expression profiles between reference and query data.

Authors:Ruth Kristianingsih [aut, cre]

greatR_2.0.0.9000.tar.gz
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greatR.pdf |greatR.html✨
greatR/json (API)
NEWS

# Install 'greatR' in R:
install.packages('greatR', repos = c('https://ruthkr.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ruthkr/greatr/issues

Pkgdown site:https://ruthkr.github.io

On CRAN:

5.25 score 1 stars 11 scripts 315 downloads 3 exports 43 dependencies

Last updated 7 months agofrom:e9853aded2. Checks:1 OK, 7 ERROR. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 11 2025
R-4.5-winERRORFeb 11 2025
R-4.5-macERRORFeb 11 2025
R-4.5-linuxERRORFeb 11 2025
R-4.4-winERRORFeb 11 2025
R-4.4-macERRORFeb 11 2025
R-4.3-winERRORFeb 11 2025
R-4.3-macERRORFeb 11 2025

Exports:calculate_distanceget_approximate_stretchregister

Dependencies:clicodetoolscolorspacedata.tabledigestfansifarverfurrrfutureggplot2globalsgluegtableisobandlabelinglatticelifecyclelistenvmagrittrMASSMatrixmgcvmunsellneldermeadnlmeoptimbaseoptimizationoptimsimplexparallellypatchworkpillarpkgconfigpurrrR6RColorBrewerRcpprlangscalestibbleutf8vctrsviridisLitewithr

Input data requirements

Rendered fromdata-requirement.Rmdusingknitr::rmarkdownon Feb 11 2025.

Last update: 2024-03-24
Started: 2023-02-22

Processing results

Rendered fromprocess-results.Rmdusingknitr::rmarkdownon Feb 11 2025.

Last update: 2024-03-24
Started: 2024-03-24

Registering data

Rendered fromregister-data.Rmdusingknitr::rmarkdownon Feb 11 2025.

Last update: 2024-03-24
Started: 2021-10-19

Registering data without optimisation

Rendered fromregister-data-manually.Rmdusingknitr::rmarkdownon Feb 11 2025.

Last update: 2024-03-24
Started: 2023-02-22