Package: greatR 2.0.0.9000

greatR: Gene Registration from Expression and Time-Courses in R

A tool for registering (aligning) gene expression profiles between reference and query data.

Authors:Ruth Kristianingsih [aut, cre]

greatR_2.0.0.9000.tar.gz
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greatR.pdf |greatR.html✨
greatR/json (API)
NEWS

# Install 'greatR' in R:
install.packages('greatR', repos = c('https://ruthkr.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ruthkr/greatr/issues

On CRAN:

5.42 score 11 scripts 267 downloads 3 exports 43 dependencies

Last updated 4 months agofrom:e9853aded2. Checks:OK: 1 ERROR: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 14 2024
R-4.5-winERROROct 14 2024
R-4.5-linuxERROROct 14 2024
R-4.4-winERROROct 14 2024
R-4.4-macERROROct 14 2024
R-4.3-winERROROct 14 2024
R-4.3-macERROROct 14 2024

Exports:calculate_distanceget_approximate_stretchregister

Dependencies:clicodetoolscolorspacedata.tabledigestfansifarverfurrrfutureggplot2globalsgluegtableisobandlabelinglatticelifecyclelistenvmagrittrMASSMatrixmgcvmunsellneldermeadnlmeoptimbaseoptimizationoptimsimplexparallellypatchworkpillarpkgconfigpurrrR6RColorBrewerRcpprlangscalestibbleutf8vctrsviridisLitewithr

Input data requirements

Rendered fromdata-requirement.Rmdusingknitr::rmarkdownon Oct 14 2024.

Last update: 2024-03-24
Started: 2023-02-22

Processing results

Rendered fromprocess-results.Rmdusingknitr::rmarkdownon Oct 14 2024.

Last update: 2024-03-24
Started: 2024-03-24

Registering data

Rendered fromregister-data.Rmdusingknitr::rmarkdownon Oct 14 2024.

Last update: 2024-03-24
Started: 2021-10-19

Registering data without optimisation

Rendered fromregister-data-manually.Rmdusingknitr::rmarkdownon Oct 14 2024.

Last update: 2024-03-24
Started: 2023-02-22